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Found 12 results
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Cooper, Laurel
[Clear All Filters]
2023
A. E. Thessen
,
Jaiswal, P.
,
Cooper, L.
,
Swetnam, T. L.
,
Hegde, H.
,
Resse, J.
, and
Elser, J.
,
“
Using knowledge graphs to infer gene expression in plants
”
. 2023.
2020
E. Arnaud
,
Laporte, M. - A.
,
Kim, S.
,
Aubert, C.
,
Leonelli, S.
,
Miro, B.
,
Cooper, L.
,
Jaiswal, P.
,
Kruseman, G.
,
Shrestha, R.
,
Buttigieg, P. L.
,
Mungall, C. J.
,
Pietragalla, J.
,
Agbona, A.
,
Muliro, J.
,
Detras, J.
,
Hualla, V.
,
Rathore, A.
,
Das, R. Rani
,
Dieng, I.
,
Bauchet, G.
,
Menda, N.
,
Pommier, C.
,
Shaw, F.
,
Lyon, D.
,
Mwanzia, L.
,
Juarez, H.
,
Bonaiuti, E.
,
Chiputwa, B.
,
Obileye, O.
,
Auzoux, S.
,
Yeumo, E. Dzalé
,
Mueller, L. A.
,
Silverstein, K.
,
Lafargue, A.
,
Antezana, E.
,
Devare, M.
, and
King, B.
,
“
The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.
”
,
Patterns (N Y)
, vol. 1, no. 7, p. 100105, 2020.
2019
R. L. Walls
,
Cooper, L.
,
Elser, J.
,
Gandolfo, M. A.
,
Mungall, C. J.
,
Smith, B.
,
Stevenson, D. W.
, and
Jaiswal, P.
,
“
The Plant Ontology Facilitates Comparisons of Plant Development Stages Across Species.
”
,
Frontiers in plant science
, vol. 10, p. 631, 2019.
2018
L. Harper
,
Campbell, J.
,
Cannon, E. K. S.
,
Jung, S.
,
Poelchau, M.
,
Walls, R.
,
Andorf, C.
,
Arnaud, E.
,
Berardini, T. Z.
,
Birkett, C.
,
Cannon, S.
,
Carson, J.
,
Condon, B.
,
Cooper, L.
,
Dunn, N.
,
Elsik, C. G.
,
Farmer, A.
,
Ficklin, S. P.
,
Grant, D.
,
Grau, E.
,
Herndon, N.
,
Hu, Z. - L.
,
Humann, J.
,
Jaiswal, P.
,
Jonquet, C.
,
Laporte, M. - A.
,
Larmande, P.
,
Lazo, G.
,
McCarthy, F.
,
Menda, N.
,
Mungall, C. J.
,
Munoz-Torres, M. C.
,
Naithani, S.
,
Nelson, R.
,
Nesdill, D.
,
Park, C.
,
Reecy, J.
,
Reiser, L.
,
Sanderson, L. - A.
,
Sen, T. Z.
,
Staton, M.
,
Subramaniam, S.
,
Tello-Ruiz, M. K.
,
Unda, V.
,
Unni, D.
,
Wang, L.
,
Ware, D.
,
Wegrzyn, J.
,
Williams, J.
,
Woodhouse, M.
,
Yu, J.
, and
Main, D.
,
“
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture.
”
,
Database : the journal of biological databases and curation
, vol. 2018, 2018.
L. Cooper
,
Meier, A.
,
Laporte, M. - A.
,
Elser, J. L.
,
Mungall, C.
,
Sinn, B. T.
,
Cavaliere, D.
,
Carbon, S.
,
Dunn, N. A.
,
Smith, B.
,
Qu, B.
,
Preece, J.
,
Zhang, E.
,
Todorovic, S.
,
Gkoutos, G.
,
Doonan, J. H.
,
Stevenson, D. W.
,
Arnaud, E.
, and
Jaiswal, P.
,
“
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.
”
,
Nucleic acids research
, vol. 46, no. D1, pp. D1168-D1180, 2018.
2017
B. Qu
,
Kumar, P.
,
Zhang, E.
,
Jaiswal, P.
,
Cooper, L.
,
Elser, J.
, and
Zhang, Y.
,
“
Interactive Design and Visualization of N-ary Relationships
”
, in
SIGGRAPH Asia 2017 Symposium on Visualization
, New York, NY, USA, 2017, pp. 15:1–15:8.
2016
L. Cooper
and
Jaiswal, P.
,
“
The Plant Ontology: A Tool for Plant Genomics.
”
, in
Methods in molecular biology (Clifton, N.J.)
, vol. 1374, 2016, pp. 89-114.
2015
A. Oellrich
,
Walls, R. L.
,
Cannon, E. K. S.
,
Cannon, S. B.
,
Cooper, L.
,
Gardiner, J.
,
Gkoutos, G. V.
,
Harper, L.
,
He, M.
,
Hoehndorf, R.
,
Jaiswal, P.
,
Kalberer, S. R.
,
Lloyd, J. P.
,
Meinke, D.
,
Menda, N.
,
Moore, L.
,
Nelson, R. T.
,
Pujar, A.
,
Lawrence, C. J.
, and
Huala, E.
,
“
An ontology approach to comparative phenomics in plants.
”
,
Plant methods
, vol. 11, p. 10, 2015.
2014
N. Lingutla
,
Preece, J.
,
Todorovic, S.
,
Cooper, L.
,
Moore, L.
, and
Jaiswal, P.
,
“
AISO: Annotation of Image Segments with Ontologies
”
,
Journal of Biomedical Semantics
, vol. 5, p. 50, 2014.
2012
F. Lens
,
Cooper, L.
,
Gandolfo, M. A.
,
Groover, A.
,
Jaiswal, P.
,
Lachenbruch, B.
,
Spicer, R.
,
Staton, M. E.
,
Stevenson, D. W.
,
Walls, R. L.
, and
Wegrzyn, J.
,
“
An extension of the Plant Ontology project supporting wood anatomy and development research
”
,
IAWA Journal
, vol. 33, no. 2, p. 5, 2012.
R. L. Walls
,
Athreya, B.
,
Cooper, L.
,
Elser, J.
,
Gandolfo, M. A.
,
Jaiswal, P.
,
Mungall, C. J.
,
Preece, J.
,
Rensing, S.
,
Smith, B.
, and
Stevenson, D. W.
,
“
Ontologies as integrative tools for plant science.
”
,
American journal of botany
, vol. 99, no. 8, pp. 1-13, 2012.
L. Cooper
,
Walls, R. L.
,
Elser, J.
,
Gandolfo, M. A.
,
Stevenson, D. W.
,
Smith, B.
,
Preece, J.
,
Athreya, B.
,
Mungall, C. J.
,
Rensing, S.
,
Hiss, M.
,
Lang, D.
,
Reski, R.
,
Berardini, T. Z.
,
Li, D.
,
Huala, E.
,
Schaeffer, M.
,
Menda, N.
,
Arnaud, E.
,
Shrestha, R.
,
Yamazaki, Y.
, and
Jaiswal, P.
,
“
The Plant Ontology As A Tool For Comparative Plant Anatomy And Genomic Analyses.
”
,
Plant & Cell Physiology
, 2012.
Major Grants
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