Jaiswal Lab

You are here

Biblio

Found 83 results
Filters: Author is Jaiswal, Pankaj  [Clear All Filters]
2017
B. Qu, Kumar, P., Zhang, E., Jaiswal, P., Cooper, L., Elser, J., and Zhang, Y., Interactive Design and Visualization of N-ary Relationships, in SIGGRAPH Asia 2017 Symposium on Visualization, New York, NY, USA, 2017, pp. 15:1–15:8.
S. Naithani and Jaiswal, P., Pathway Analysis and Omics Data Visualization Using Pathway Genome Databases: FragariaCyc, a Case Study., Methods in molecular biology (Clifton, N.J.), vol. 1533, pp. 241-256, 2017.
M. Geniza and Jaiswal, P., Tools for building de novo transcriptome assembly, Current Plant Biology, vol. 11-12, pp. 41 - 45, 2017.
S. Naithani, Geniza, M., and Jaiswal, P., Variant Effect Prediction Analysis Using Resources Available at Gramene Database., Methods in molecular biology (Clifton, N.J.), vol. 1533, pp. 279-297, 2017.
2016
P. Garg and Jaiswal, P., Databases and bioinformatics tools for rice research, Current Plant Biology, vol. 7-8, pp. 39 - 52, 2016.
A. C. Quandt, Di, Y., Elser, J., Jaiswal, P., and Spatafora, J. W., Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides., G3 (Bethesda, Md.), 2016.
A. C. Quandt, Di, Y., Elser, J., Jaiswal, P., and Spatafora, J. W., Differential Expression of Genes Involved in Host Recognition, Attachment, and Degradation in the Mycoparasite Tolypocladium ophioglossoides., G3 (Bethesda, Md.), vol. 6, no. 3, pp. 731-41, 2016.
R. Petryszak, Keays, M., Tang, A. Y., Fonseca, N. A., Barrera, E., Burdett, T., Füllgrabe, A., Fuentes, A. M. - P., Jupp, S., Koskinen, S., Mannion, O., Huerta, L., Megy, K., Snow, C., Williams, E., Barzine, M., Hastings, E., Weisser, H., Wright, J., Jaiswal, P., Huber, W., Choudhary, J., Parkinson, H. E., and Brazma, A., Expression Atlas update-an integrated database of gene and protein expression in humans, animals and plants., Nucleic acids research, vol. 44, no. D1, pp. D746-52, 2016.
S. Naithani, Partipilo, C. M., Raja, R., Elser, J. L., and Jaiswal, P., FragariaCyc: A Metabolic Pathway Database for Woodland Strawberry Fragaria vesca., Frontiers in plant science, vol. 7, p. 242, 2016.
M. K. Tello-Ruiz, Stein, J., Wei, S., Preece, J., Olson, A., Naithani, S., Amarasinghe, V., Dharmawardhana, P., Jiao, Y., Mulvaney, J., Kumari, S., Chougule, K., Elser, J., Wang, B., Thomason, J., Bolser, D. M., Kerhornou, A., Walts, B., Fonseca, N. A., Huerta, L., Keays, M., Tang, A. Y., Parkinson, H., Fabregat, A., McKay, S., Weiser, J., D'Eustachio, P., Stein, L., Petryszak, R., Kersey, P. J., Jaiswal, P., and Ware, D., Gramene 2016: comparative plant genomics and pathway resources., Nucleic acids research, vol. 44, no. D1, pp. D1133-40, 2016.
M. K. Tello-Ruiz, Stein, J., Wei, S., Youens-Clark, K., Jaiswal, P., and Ware, D., Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways., in Methods in molecular biology (Clifton, N.J.), vol. 1374, 2016, pp. 141-63.
P. Gupta, Naithani, S., Tello-Ruiz, M. K., Chougule, K., D'Eustachio, P., Fabregat, A., Jiao, Y., Keays, M., Lee, Y. K., Kumari, S., Mulvaney, J., Olson, A., Preece, J., Stein, J., Wei, S., Weiser, J., Huerta, L., Petryszak, R., Kersey, P., Stein, L. D., Ware, D., and Jaiswal, P., Gramene Database: Navigating Plant Comparative Genomics Resources., Current plant biology, vol. 7-8, pp. 10-15, 2016.
L. Cooper and Jaiswal, P., The Plant Ontology: A Tool for Plant Genomics., in Methods in molecular biology (Clifton, N.J.), vol. 1374, 2016, pp. 89-114.
P. Jaiswal and Usadel, B., Plant Pathway Databases., in Methods in molecular biology (Clifton, N.J.), vol. 1374, 2016, pp. 71-87.
2015
A. E. Thessen, Bunker, D. E., Buttigieg, P. L., Cooper, L. D., Dahdul, W. M., Domisch, S., Franz, N. M., Jaiswal, P., Lawrence-Dill, C. J., Midford, P. E., Mungall, C. J., Ramírez, M. J., Specht, C. D., Vogt, L., Vos, R. A., Walls, R. L., White, J. W., Zhang, G., Deans, A. R., Huala, E., Lewis, S. E., and Mabee, P. M., Emerging semantics to link phenotype and environment., PeerJ, vol. 3, p. e1470, 2015.
S. A. Filichkin, Cumbie, J. S., Dharmawardhana, P., Jaiswal, P., Chang, J. H., Palusa, S. G., Reddy, A. S. N., Megraw, M., and Mockler, T. C., Environmental stresses modulate abundance and timing of alternatively spliced circadian transcripts in Arabidopsis., Molecular plant, vol. 8, no. 2, pp. 207-27, 2015.
A. R. Deans, Lewis, S. E., Huala, E., Anzaldo, S. S., Ashburner, M., Balhoff, J. P., Blackburn, D. C., Blake, J. A., Burleigh, G. J., Chanet, B., Cooper, L. D., Courtot, M., Csösz, S., Cui, H., Dahdul, W., Das, S., Dececchi, A. T., Dettai, A., Diogo, R., Druzinsky, R. E., Dumontier, M., Franz, N. M., Friedrich, F., Gkoutos, G. V., Haendel, M., Harmon, L. J., Hayamizu, T. F., He, Y., Hines, H. M., Ibrahim, N., Jackson, L. M., Jaiswal, P., James-Zorn, C., Köhler, S., Lecointre, G., Lapp, H., Lawrence, C. J., Le Novère, N., Lundberg, J. G., Macklin, J., Mast, A. R., Midford, P. E., Mikó, I., Mungall, C. J., Oellrich, A., Osumi-Sutherland, D., Parkinson, H., Ramírez, M. J., Richter, S., Robinson, P. N., Ruttenberg, A., Schulz, K. S., Segerdell, E., Seltmann, K. C., Sharkey, M. J., Smith, A. D., Smith, B., Specht, C. D., Squires, B. R., Thacker, R. W., Thessen, A., Fernandez-Triana, J., Vihinen, M., Vize, P. D., Vogt, L., Wall, C. E., Walls, R. L., Westerfeld, M., Wharton, R. A., Wirkner, C. S., Woolley, J. B., Yoder, M. J., Zorn, A. M., and Mabee, P., Finding Our Way through Phenotypes, PLoS Biol, vol. 13, p. e1002033, 2015.
A. Oellrich, Walls, R. L., Cannon, E. K. S., Cannon, S. B., Cooper, L., Gardiner, J., Gkoutos, G. V., Harper, L., He, M., Hoehndorf, R., Jaiswal, P., Kalberer, S. R., Lloyd, J. P., Meinke, D., Menda, N., Moore, L., Nelson, R. T., Pujar, A., Lawrence, C. J., and Huala, E., An ontology approach to comparative phenomics in plants., Plant methods, vol. 11, p. 10, 2015.
R. C. Graebner, Wise, M., Cuesta-Marcos, A., Geniza, M., Blake, T., Blake, V. C., Butler, J., Chao, S., Hole, D. J., Horsley, R., Jaiswal, P., Obert, D., Smith, K. P., Ullrich, S., and Hayes, P. M., Quantitative Trait Loci Associated with the Tocochromanol (Vitamin E) Pathway in Barley., PloS one, vol. 10, no. 7, p. e0133767, 2015.

Pages