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2021
“
The Gene Ontology resource: enriching a GOld mine.
”
,
Nucleic Acids Res
, vol. 49, no. D1, pp. D325-D334, 2021.
2018
S. Naithani
,
Preece, J.
,
D'Eustachio, P.
,
Gupta, P.
,
Amarasinghe, V.
,
Dharmawardhana, P. D.
,
Wu, G.
,
Fabregat, A.
,
Elser, J. L.
,
Weiser, J.
,
Keays, M.
,
Munoz-Pomer Fuentes, A.
,
Petryszak, R.
,
Stein, L. D.
,
Ware, D.
, and
Jaiswal, P.
,
“
Plant Reactome: a resource for plant pathways and comparative analysis.
”
,
Nucleic acids research
, vol. 45, no. D1, pp. D1029-D1039, 2018.
L. Cooper
,
Meier, A.
,
Laporte, M. - A.
,
Elser, J. L.
,
Mungall, C.
,
Sinn, B. T.
,
Cavaliere, D.
,
Carbon, S.
,
Dunn, N. A.
,
Smith, B.
,
Qu, B.
,
Preece, J.
,
Zhang, E.
,
Todorovic, S.
,
Gkoutos, G.
,
Doonan, J. H.
,
Stevenson, D. W.
,
Arnaud, E.
, and
Jaiswal, P.
,
“
The Planteome database: an integrated resource for reference ontologies, plant genomics and phenomics.
”
,
Nucleic acids research
, vol. 46, no. D1, pp. D1168-D1180, 2018.
2017
S. Naithani
,
Geniza, M.
, and
Jaiswal, P.
,
“
Variant Effect Prediction Analysis Using Resources Available at Gramene Database.
”
,
Methods in molecular biology (Clifton, N.J.)
, vol. 1533, pp. 279-297, 2017.
2011
S. Smita
,
Lenka, S. K.
,
Katiyar, A.
,
Jaiswal, P.
,
Preece, J.
, and
Bansal, K. C.
,
“
QlicRice: a web interface for abiotic stress responsive QTL and loci interaction channels in rice.
”
,
Database : the journal of biological databases and curation
, vol. 2011, p. bar037, 2011.
2010
“
The Gene Ontology in 2010: extensions and refinements.
”
,
Nucleic acids research
, vol. 38, no. Database issue, pp. D331-5, 2010.
2008
C. Liang
,
Jaiswal, P.
,
Hebbard, C.
,
Avraham, S.
,
Buckler, E. S.
,
Casstevens, T.
,
Hurwitz, B.
,
McCouch, S.
,
Ni, J.
,
Pujar, A.
,
Ravenscroft, D.
,
Ren, L.
,
Spooner, W.
,
Tecle, I.
,
Thomason, J.
,
Tung, C. - W.
,
Wei, X.
,
Yap, I.
,
Youens-Clark, K.
,
Ware, D.
, and
Stein, L.
,
“
Gramene: a growing plant comparative genomics resource.
”
,
Nucleic acids research
, vol. 36, no. Database issue, pp. D947-53, 2008.
S. Avraham
,
Tung, C. - W.
,
Ilic, K.
,
Jaiswal, P.
,
Kellogg, E. A.
,
McCouch, S.
,
Pujar, A.
,
Reiser, L.
,
Rhee, S. Y.
,
Sachs, M. M.
,
Schaeffer, M.
,
Stein, L.
,
Stevens, P.
,
Vincent, L.
,
Zapata, F.
, and
Ware, D.
,
“
The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations.
”
,
Nucleic acids research
, vol. 36, no. Database issue, pp. D449-54, 2008.
2007
K. Ilic
,
Kellogg, E. A.
,
Jaiswal, P.
,
Zapata, F.
,
Stevens, P. F.
,
Vincent, L. P.
,
Avraham, S.
,
Reiser, L.
,
Pujar, A.
,
Sachs, M. M.
,
Whitman, N. T.
,
McCouch, S. R.
,
Schaeffer, M. L.
,
Ware, D. H.
,
Stein, L. D.
, and
Rhee, S. Y.
,
“
The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant.
”
,
Plant physiology
, vol. 143, no. 2, pp. 587-99, 2007.
2006
P. Jaiswal
,
Ni, J.
,
Yap, I.
,
Ware, D.
,
Spooner, W.
,
Youens-Clark, K.
,
Ren, L.
,
Liang, C.
,
Zhao, W.
,
Ratnapu, K.
,
Faga, B.
,
Canaran, P.
,
Fogleman, M.
,
Hebbard, C.
,
Avraham, S.
,
Schmidt, S.
,
Casstevens, T. M.
,
Buckler, E. S.
,
Stein, L.
, and
McCouch, S.
,
“
Gramene: a bird's eye view of cereal genomes.
”
,
Nucleic acids research
, vol. 34, no. Database issue, pp. D717-23, 2006.
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