@article{63, author = {Kevin Howe and Bruno Contreras-Moreira and Nishadi De Silva and Gareth Maslen and Wasiu Akanni and James Allen and Jorge Alvarez-Jarreta and Matthieu Barba and Dan Bolser and Lahcen Cambell and Manuel Carbajo and Marc Chakiachvili and Mikkel Christensen and Carla Cummins and Alayne Cuzick and Paul Davis and Silvie Fexova and Astrid Gall and Nancy George and Laurent Gil and Parul Gupta and Kim Hammond-Kosack and Erin Haskell and Sarah Hunt and Pankaj Jaiswal and Sophie Janacek and Paul Kersey and Nick Langridge and Uma Maheswari and Thomas Maurel and Mark McDowall and Ben Moore and Matthieu Muffato and Guy Naamati and Sushma Naithani and Andrew Olson and Irene Papatheodorou and Mateus Patricio and Michael Paulini and Helder Pedro and Emily Perry and Justin Preece and Marc Rosello and Matthew Russell and Vasily Sitnik and Daniel Staines and Joshua Stein and Marcela Tello-Ruiz and Stephen Trevanion and Martin Urban and Sharon Wei and Doreen Ware and Gary Williams and Andrew Yates and Paul Flicek}, title = {Ensembl Genomes 2020-enabling non-vertebrate genomic research.}, abstract = {Ensembl Genomes (http://www.ensemblgenomes.org) is an integrating resource for genome-scale data from non-vertebrate species, complementing the resources for vertebrate genomics developed in the context of the Ensembl project (http://www.ensembl.org). Together, the two resources provide a consistent set of interfaces to genomic data across the tree of life, including reference genome sequence, gene models, transcriptional data, genetic variation and comparative analysis. Data may be accessed via our website, online tools platform and programmatic interfaces, with updates made four times per year (in synchrony with Ensembl). Here, we provide an overview of Ensembl Genomes, with a focus on recent developments. These include the continued growth, more robust and reproducible sets of orthologues and paralogues, and enriched views of gene expression and gene function in plants. Finally, we report on our continued deeper integration with the Ensembl project, which forms a key part of our future strategy for dealing with the increasing quantity of available genome-scale data across the tree of life.}, year = {2019}, journal = {Nucleic acids research}, month = {2019 Oct 10}, issn = {1362-4962}, doi = {10.1093/nar/gkz890}, language = {eng}, }