03921nas a2201045   4500000000100000000000100001008004100002260001600043653001200059653002600071653002300097653002200120653001900142653001800161653001300179653001300192653001100205653001300216653001600229100001700245700001600262700001700278700001600295700001900311700002000330700001800350700002000368700002000388700002200408700002000430700002300450700002800473700001800501700001800519700001500537700002100552700002400573700001500597700001700612700002000629700001600649700002600665700002900691700001600720700002300736700001500759700001900774700001800793700001600811700001800827700001900845700001200864700002000876700001800896700001800914700001900932700002100951700001900972700001600991700002001007700001701027700001601044700002001060700001701080700001601097700001801113700002501131700001701156700001701173700001901190700001701209700001801226700001701244700001401261700002301275700002201298700001701320700001601337700001501353700001801368700002401386700002501410700001601435700001601451245007601467300001501543490000701558520129601565022001402861       2022                            d  c2022 Jan 0710aAnimals10aComputational Biology10aDatabases, Genetic10aGenome, Bacterial10aGenome, Fungal10aGenome, Plant10aGenomics10aInternet10aPlants10aSoftware10aVertebrates1 aAndrew Yates1 aJames Allen1 aRidwan Amode1 aAndrey Azov1 aMatthieu Barba1 aAndrés Becerra1 aJyothish Bhai1 aLahcen Campbell1 aManuel Martinez1 aMarc Chakiachvili1 aKapeel Chougule1 aMikkel Christensen1 aBruno Contreras-Moreira1 aAlayne Cuzick1 aLuca Fioretto1 aPaul Davis1 aNishadi De Silva1 aStavros Diamantakis1 aSarah Dyer1 aJustin Elser1 aCarla Filippi V1 aAstrid Gall1 aDionysios Grigoriadis1 aCristina Guijarro-Clarke1 aParul Gupta1 aKim Hammond-Kosack1 aKevin Howe1 aPankaj Jaiswal1 aVinay Kaikala1 aVivek Kumar1 aSunita Kumari1 aNick Langridge1 aTuan Le1 aManuel Luypaert1 aGareth Maslen1 aThomas Maurel1 aBenjamin Moore1 aMatthieu Muffato1 aAleena Mushtaq1 aGuy Naamati1 aSushma Naithani1 aAndrew Olson1 aAnne Parker1 aMichael Paulini1 aHelder Pedro1 aEmily Perry1 aJustin Preece1 aMark Quinton-Tulloch1 aFaye Rodgers1 aMarc Rosello1 aMagali Ruffier1 aJames Seager1 aVasily Sitnik1 aMichal Szpak1 aJohn Tate1 aMarcela Tello-Ruiz1 aStephen Trevanion1 aMartin Urban1 aDoreen Ware1 aSharon Wei1 aGary Williams1 aAndrea Winterbottom1 aMagdalena Zarowiecki1 aRobert Finn1 aPaul Flicek00aEnsembl Genomes 2022: an expanding genome resource for non-vertebrates.  aD996-D10030 v503 a<p>Ensembl Genomes (https://www.ensemblgenomes.org) provides access to non-vertebrate genomes and analysis complementing vertebrate resources developed by the Ensembl project (https://www.ensembl.org). The two resources collectively present genome annotation through a consistent set of interfaces spanning the tree of life presenting genome sequence, annotation, variation, transcriptomic data and comparative analysis. Here, we present our largest increase in plant, metazoan and fungal genomes since the project's inception creating one of the world's most comprehensive genomic resources and describe our efforts to reduce genome redundancy in our Bacteria portal. We detail our new efforts in gene annotation, our emerging support for pangenome analysis, our efforts to accelerate data dissemination through the Ensembl Rapid Release resource and our new AlphaFold visualization. Finally, we present details of our future plans including updates on our integration with Ensembl, and how we plan to improve our support for the microbial research community. Software and data are made available without restriction via our website, online tools platform and programmatic interfaces (available under an Apache 2.0 license). Data updates are synchronised with Ensembl's release cycle.</p>
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