Justin Elser

Shulaev, V., Sargent, D. J., Crowhurst, R. N., Mockler, T. C., Folkerts, O., Delcher, A. L., … Folta, K. M. (2011). The genome of woodland strawberry(Fragaria vesca). Nature Genetics, 43(2), 109-16. (Original work published 2011)

Padgitt-Cobb, L. K., Kingan, S. B., Wells, J., Elser, J., Kronmiller, B., Moore, D., … Hendrix, D. A. (2021). A draft phased assembly of the diploid Cascade hop (Humulus lupulus) genome. Plant Genome, 14(1), e20072. https://doi.org/10.1002/tpg2.20072 (Original work published 2021)

Walls, R. L., Athreya, B., Cooper, L., Elser, J., Gandolfo, M. A., Jaiswal, P., … Stevenson, D. W. (2012). Ontologies as integrative tools for plant science. American Journal of Botany, 99(8), 1-13. https://doi.org/10.3732/ajb.1200222 (Original work published)

Tello-Ruiz, M. K., Naithani, S., Gupta, P., Olson, A., Wei, S., Preece, J., … Ware, D. (2021). Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. Nucleic Acids Res, 49(D1), D1452-D1463. https://doi.org/10.1093/nar/gkaa979 (Original work published)

Cooper, L., Walls, R. L., Elser, J., Gandolfo, M. A., Stevenson, D. W., Smith, B., … Jaiswal, P. (2012). The Plant Ontology As A Tool For Comparative Plant Anatomy And Genomic Analyses. Plant & Cell Physiology. https://doi.org/10.1093/pcp/pcs163 (Original work published)

Naithani, S., Mohanty, B., Elser, J., D’Eustachio, P., & Jaiswal, P. (2023). Biocuration of a Transcription Factors Network Involved in Submergence Tolerance during Seed Germination and Coleoptile Elongation in Rice (Oryza sativa). Plants, 12, 2146. https://doi.org/10.3390/plants12112146

Hanumappa, M., Preece, J., Elser, J., Nemeth, D., Bono, G., Wu, K., & Jaiswal, P. (2013). WikiPathways for plants: a community pathway curation portal and a case study in rice and arabidopsis seed development networks. Rice, 6. https://doi.org/10.1186/1939-8433-6-14 (Original work published 2013)

Thessen, A. E., Jaiswal, P., Cooper, L., Swetnam, T. L., Hegde, H., Resse, J., & Elser, J. (2023). Using knowledge graphs to infer gene expression in plants. https://doi.org/10.5281/zenodo.7764762

Bushley, K. E., Raja, R., Jaiswal, P., Cumbie, J. S., Nonogaki, M., Boyd, A. E., … Spatafora, J. W. (2013). The Genome of Tolypocladium inflatum: Evolution, Organization, and Expression of the Cyclosporin Biosynthetic Gene Cluster. PLOS Genetics, 9(6). https://doi.org/10.1371/journal.pgen.1003496 (Original work published 2013)

Fox, S. E., Geniza, M., Hanumappa, M., Naithani, S., Sullivan, C. M., Preece, J., … Jaiswal, P. (2014). De Novo Transcriptome Assembly and Analyses of Gene Expression during Photomorphogenesis in Diploid Wheat Triticum monococcum. PLoS ONE, 9(5). https://doi.org/10.1371/journal.pone.0096855 (Original work published 2014)