Contreras-Moreira, B., Sharma, E., Saraf, S., Naamati, G., Gupta, P., Elser, J., … Jones, A. (2025). A pan-gene catalogue of Asian cultivated rice. BioRxiv : The Preprint Server for Biology. https://doi.org/10.1101/2025.02.17.638606 (Original work published 2025)
First name
Doreen
Last name
Ware
Avraham, S., Tung, C.-W., Ilic, K., Jaiswal, P., Kellogg, E. A., McCouch, S., … Ware, D. (2008). The Plant Ontology Database: a community resource for plant structure and developmental stages controlled vocabulary and annotations. Nucleic Acids Research, 36(Database issue), D449-54. (Original work published 2008)
Harper, L., Campbell, J., Cannon, E. K., Jung, S., Poelchau, M., Walls, R., … Main, D. (2018). AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database : The Journal of Biological Databases and Curation, 2018. https://doi.org/10.1093/database/bay088 (Original work published)
Liang, C., Jaiswal, P., Hebbard, C., Avraham, S., Buckler, E. S., Casstevens, T., … Stein, L. (2008). Gramene: a growing plant comparative genomics resource. Nucleic Acids Research, 36(Database issue), D947-53. (Original work published 2008)
Tello-Ruiz, M. K., Jaiswal, P., & Ware, D. (2022). Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways. Methods Mol Biol, 2443, 101-131. https://doi.org/10.1007/978-1-0716-2067-0_5 (Original work published 2022)
Pujar, A., Jaiswal, P., Kellogg, E. A., Ilic, K., Vincent, L., Avraham, S., … McCouch, S. (2006). Whole-plant growth stage ontology for angiosperms and its application in plant biology. Plant Physiology, 142(2), 414-28. (Original work published 2006)
Yates, A. D., Allen, J., Amode, R. M., Azov, A. G., Barba, M., Becerra, A., … Flicek, P. (2022). Ensembl Genomes 2022: an expanding genome resource for non-vertebrates. Nucleic Acids Res, 50(D1), D996-D1003. https://doi.org/10.1093/nar/gkab1007 (Original work published)
Jaiswal, P., Ni, J., Yap, I., Ware, D., Spooner, W., Youens-Clark, K., … McCouch, S. (2006). Gramene: a bird’s eye view of cereal genomes. Nucleic Acids Research, 34(Database issue), D717-23. (Original work published)
Tello-Ruiz, M. K., Naithani, S., Gupta, P., Olson, A., Wei, S., Preece, J., … Ware, D. (2021). Gramene 2021: harnessing the power of comparative genomics and pathways for plant research. Nucleic Acids Res, 49(D1), D1452-D1463. https://doi.org/10.1093/nar/gkaa979 (Original work published)
Ni, J., Pujar, A., Youens-Clark, K., Yap, I., Jaiswal, P., Tecle, I., … McCouch, S. (2009). Gramene QTL database: development, content and applications. Database : The Journal of Biological Databases and Curation, 2009, bap005. (Original work published 2009)