Doreen Ware

Contreras-Moreira, B., Sharma, E., Saraf, S., Naamati, G., Gupta, P., Elser, J., … Jones, A. (2025). A pan-gene catalogue of Asian cultivated rice. BioRxiv : The Preprint Server for Biology. https://doi.org/10.1101/2025.02.17.638606 (Original work published 2025)

Ni, J., Pujar, A., Youens-Clark, K., Yap, I., Jaiswal, P., Tecle, I., … McCouch, S. (2009). Gramene QTL database: development, content and applications. Database : The Journal of Biological Databases and Curation, 2009, bap005. (Original work published 2009)

Naithani, S., Gupta, P., Preece, J., D’Eustachio, P., Elser, J. L., Garg, P., … Jaiswal, P. (2020). Plant Reactome: a knowledgebase and resource for comparative pathway analysis. Nucleic Acids Res, 48(D1), D1093-D1103. https://doi.org/10.1093/nar/gkz996 (Original work published)

Ware, D., Jaiswal, P., Ni, J., Pan, X., Chang, K., Clark, K., … Stein, L. (2002). Gramene: a resource for comparative grass genomics. Nucleic Acids Research, 30(1), 103-5. (Original work published)

Youens-Clark, K., Buckler, E., Casstevens, T., Chen, C., Declerck, G., Derwent, P., … Ware, D. (2011). Gramene database in 2010: updates and extensions. Nucleic Acids Research, 39(Database issue), D1085-94. (Original work published 2011)

Monaco, M. K., Sen, T. Z., Dharmawardhana, P. D., Ren, L., Schaeffer, M., Naithani, S., … Jaiswal, P. (2013). Maize Metabolic Network Construction and Transcriptome Analysis. The Plant Genome, 6(1), 1-12. https://doi.org/10.3835/plantgenome2012.09.0025 (Original work published 2013)

Dharmawardhana, P., Ren, L., Amarasinghe, V., Monaco, M., Thomason, J., Ravenscroft, D., … Jaiswal, P. (2013). A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress. Rice, 6. https://doi.org/10.1186/1939-8433-6-15 (Original work published 2013)

Monaco, M. K., Stein, J., Naithani, S., Wei, S., Dharmawardhana, P., Kumari, S., … Ware, D. (2014). Gramene 2013: comparative plant genomics resources. Nucleic Acids Research, 42(Database issue), D1193-9. https://doi.org/10.1093/nar/gkt1110 (Original work published 2014)

Tello-Ruiz, M. K., Stein, J., Wei, S., Preece, J., Olson, A., Naithani, S., … Ware, D. (2016). Gramene 2016: comparative plant genomics and pathway resources. Nucleic Acids Research, 44(D1), D1133-40. https://doi.org/10.1093/nar/gkv1179 (Original work published)

Tello-Ruiz, M. K., Stein, J., Wei, S., Youens-Clark, K., Jaiswal, P., & Ware, D. (2016). Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways. In Methods in molecular biology (Clifton, N.J.) (Vol. 1374, pp. 141-63). https://doi.org/10.1007/978-1-4939-3167-5_7 (Original work published 2016)