First name
Doreen
Last name
Ware
Contreras-Moreira, B., Sharma, E., Saraf, S., Naamati, G., Gupta, P., Elser, J., et al. (2025). A pan-gene catalogue of Asian cultivated rice. Biorxiv : The Preprint Server For Biology. https://doi.org/10.1101/2025.02.17.638606 (Original work published 2025)
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Dharmawardhana, P., Ren, L., Amarasinghe, V., Monaco, M., Thomason, J., Ravenscroft, D., et al. (2013). A genome scale metabolic network for rice and accompanying analysis of tryptophan, auxin and serotonin biosynthesis regulation under biotic stress. Rice, 6. https://doi.org/10.1186/1939-8433-6-15 (Original work published 2013)
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Monaco, M. K., Stein, J., Naithani, S., Wei, S., Dharmawardhana, P., Kumari, S., et al. (2014). Gramene 2013: comparative plant genomics resources. Nucleic Acids Research, 42(Database issue), D1193-9. https://doi.org/10.1093/nar/gkt1110 (Original work published 2014 Jan C.E.)
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Tello-Ruiz, M. K., Stein, J., Wei, S., Preece, J., Olson, A., Naithani, S., et al. (2016). Gramene 2016: comparative plant genomics and pathway resources. Nucleic Acids Research, 44(D1), D1133-40. https://doi.org/10.1093/nar/gkv1179 (Original work published 2016 Jan 4 C.E.)
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Tello-Ruiz, M. K., Stein, J., Wei, S., Youens-Clark, K., Jaiswal, P., & Ware, D. (2016). Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways. In Methods in molecular biology (Clifton, N.J.) (Vol. 1374, pp. 141-63). https://doi.org/10.1007/978-1-4939-3167-5_7 (Original work published 2016)
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Tello-Ruiz, M. K., Naithani, S., Stein, J. C., Gupta, P., Campbell, M., Olson, A., et al. (2018). Gramene 2018: unifying comparative genomics and pathway resources for plant research. Nucleic Acids Research, 46(D1), D1181-D1189. https://doi.org/10.1093/nar/gkx1111 (Original work published 2018 Jan 04 C.E.)
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Gupta, P., Naithani, S., Tello-Ruiz, M. K., Chougule, K., D'Eustachio, P., Fabregat, A., et al. (2016). Gramene Database: Navigating Plant Comparative Genomics Resources. Current Plant Biology, 7-8, 10-15. https://doi.org/10.1016/j.cpb.2016.12.005 (Original work published 2016 Nov C.E.)
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Jaiswal, P., Avraham, S., Ilic, K., Kellogg, E. A., McCouch, S., Pujar, A., et al. (2005). Plant Ontology (PO): a Controlled Vocabulary of Plant Structures and Growth Stages. Comparative And Functional Genomics, 6(7-8), 388-97. (Original work published 2005)
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Naithani, S., Preece, J., D'Eustachio, P., Gupta, P., Amarasinghe, V., Dharmawardhana, P. D., et al. (2018). Plant Reactome: a resource for plant pathways and comparative analysis. Nucleic Acids Research, 45(D1), D1029-D1039. https://doi.org/10.1093/nar/gkw932 (Original work published 2017 Jan 04 C.E.)
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Jaiswal, P., Ware, D., Ni, J., Chang, K., Zhao, W., Schmidt, S., et al. (2002). Gramene: development and integration of trait and gene ontologies for rice. Comparative And Functional Genomics, 3(2), 132-6. (Original work published 2002)
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